CDS

Accession Number TCMCG029C28775
gbkey CDS
Protein Id XP_023731657.1
Location complement(join(343753..343874,344081..344240,344308..344388,344479..344526,344609..344746,344848..344958,345068..345372,345547..345837,345959..346038,346318..346397,346777..346900,347242..347243))
Gene LOC111879430
GeneID 111879430
Organism Lactuca sativa

Protein

Length 513aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA432228
db_source XM_023875889.1
Definition DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X4 [Lactuca sativa]

EGGNOG-MAPPER Annotation

COG_category H
Description Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis
KEGG_TC -
KEGG_Module -
KEGG_Reaction R00942        [VIEW IN KEGG]
R02237        [VIEW IN KEGG]
R04241        [VIEW IN KEGG]
KEGG_rclass RC00064        [VIEW IN KEGG]
RC00090        [VIEW IN KEGG]
RC00162        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01930        [VIEW IN KEGG]
EC 6.3.2.17        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00790        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01523        [VIEW IN KEGG]
map00790        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01523        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004326        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006575        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006760        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009108        [VIEW IN EMBL-EBI]
GO:0009396        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009853        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016879        [VIEW IN EMBL-EBI]
GO:0016881        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042398        [VIEW IN EMBL-EBI]
GO:0042558        [VIEW IN EMBL-EBI]
GO:0042559        [VIEW IN EMBL-EBI]
GO:0043094        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046900        [VIEW IN EMBL-EBI]
GO:0046901        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATCGGAGTAATTCCGAAGAACTTGAAAATTGGAGCTCTGAATTTTGGGATATCTAGACGAATGGGGTGTCAAGAACTCTCTTCAAGTTCAAAGTCGAAATGTTCCTTAAGCAGCCAGCCAGAGGAAACTACAGCTGAAGGTGCCAACAACAATGGGGAAACCTCTGCTGGAATGACAGTTCAAGAGCTTAAAACTAAATTGAGGAGTGTGGGGGTTCCAACAGCAGGTTCTAAAGATGATCTTGTATGCACTTGGAACAAATTCTTTTCTGAAGAAGTTGATGAGTTTCAAGAGGTTGTTGAAGATGAAAAATCCACCAGAGTGAATGATGTTCATGGTGAAAAGGTTTCCAAAAGGAAGGCAAAAAGTTTGTCTGCTGAAGAACATGCTGAGGTTATGAGCACTGTTAATTCTGTAGATAAAAGGAGCACGAGACGTGCAAAACAAACCCATGCAGATCCAAACATCACTGTTGAGACTTGTGGACATATGCAGTCAAGAGTTGCAAAGACAAAATCTAAAGCTAAAAGTAATACCAAGAAAGAGCCTCCTCTGAACACCAATAAGGTGTCAGGTAAAAAAGCAACCTGCTTAACATCAGAAGTTGTTTCTGAAACATGCAATAAGATGGATGTTTCTGAACTTCCAGTTGAACCATGGACTGTTCTTGCTCACAAGAAGCCACAAAAAGATTGGATACCTTACAACCCTAGAACTATGAGACCTCCTCCTCTTGCTGATGATGCAAAACATGTGAAGCTAATGTCTTGGAATGTCAATGGTTTGAGGGCTTTGCTAAAACTGGAGAGCTTTTCTGCTTTAGAGCTTGCACAAAGAGAAGATTTTGATGTACTTTGCTTACAAGAAACAAAATTGCAGGAGAAAGATGTAGAAGCAATCAAACAACGTCTTTTGGAAGGATATGAGAATAGCTTTTGGACTTGTAGTGTCTCAAAGCTTGGATACTCTGGGACTGCAATTATCTCTAGGATACCACCAGTTTCTGTTAGATATGGAGTTGGGATATCAGATCATGATAATGAAGGAAGGCTTGTGACAACAGAATTTGATTCATTTTATCTAATAAGTGGATATGTTCCTAATTCTGGTGATGGTCTGAAAAGGCTGTCATACAGGACAACAGAGTGGGATCCTACTCTTAGCAATTATGTGAAGGAGCTGGAAAAGTCAAAACCTGTCATCTTAACTGGTGATCTGAATTGTGCTCATCAAGAAATAGACATCTACAATCCTGCAGGAAACAAGCGAAGTGCTGGTTTTACAATTGAGGAAAGAATGTCATTTGAGGAAAATTTCCTAAAAAAAGGTTTTGTTGATACCTTCCGGAAACAGCATCCTAATGTTGTTGGCTATACTTACTGGGGTTTCAGGCATGGTGGGCGAAAAAATAACAGAGGATGGAGGCTGGACTACTTCCTTGTATCAGAGTCGATTGCAGATAAAGTCCATGACTCTTTCATTCTTCCAGATGTTACAGGCAGTGATCACTGTCCAATTGGCCTTGTTCTTAAGCTGTAA
Protein:  
MIGVIPKNLKIGALNFGISRRMGCQELSSSSKSKCSLSSQPEETTAEGANNNGETSAGMTVQELKTKLRSVGVPTAGSKDDLVCTWNKFFSEEVDEFQEVVEDEKSTRVNDVHGEKVSKRKAKSLSAEEHAEVMSTVNSVDKRSTRRAKQTHADPNITVETCGHMQSRVAKTKSKAKSNTKKEPPLNTNKVSGKKATCLTSEVVSETCNKMDVSELPVEPWTVLAHKKPQKDWIPYNPRTMRPPPLADDAKHVKLMSWNVNGLRALLKLESFSALELAQREDFDVLCLQETKLQEKDVEAIKQRLLEGYENSFWTCSVSKLGYSGTAIISRIPPVSVRYGVGISDHDNEGRLVTTEFDSFYLISGYVPNSGDGLKRLSYRTTEWDPTLSNYVKELEKSKPVILTGDLNCAHQEIDIYNPAGNKRSAGFTIEERMSFEENFLKKGFVDTFRKQHPNVVGYTYWGFRHGGRKNNRGWRLDYFLVSESIADKVHDSFILPDVTGSDHCPIGLVLKL